1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP03G03610.1

TP03G03610.1


Description : Tetratricopeptide repeat; TPR repeat; STI1 domain [Interproscan].


Gene families : OG_01_0000105 (OrthoFinder) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP03G03610.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000767.8 tig00000767_g3954.t1 Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00001286.6 tig00001286_g8022.t1 Hsp70-Hsp90 organizing protein OS=Triticum aestivum 0.04 OrthoFinder
Cre03.g189950 30786610, HOP1 Hsp70-Hsp90 organizing protein OS=Triticum aestivum 0.05 OrthoFinder
Dusal.0549s00002.1 33192510 STI1 domain; Tetratricopeptide repeat [Interproscan]. 0.01 OrthoFinder
PTI_01G02960.1 No alias STI1 domain; Tetratricopeptide repeat; TPR repeat [Interproscan]. 0.07 OrthoFinder
PTI_11G01810.1 No alias Prefoldin beta-like [Interproscan]. 0.02 OrthoFinder
Sro1153_g247040.1 Contig4473.g33619 Stress-induced-phosphoprotein 1 0.02 OrthoFinder
Transcript_contig_78957 78957 Tetratricopeptide repeat; Tetratricopeptide repeat 1;... 0.04 OrthoFinder
XM_002500337.1 MICPUN_56687, 56687 STI1 domain; Tetratricopeptide repeat 1;... 0.02 OrthoFinder
XM_003059065.1 MicpuC2_33798, 33798 STI1 domain; TPR repeat [Interproscan]. 0.04 OrthoFinder
XM_003059828.1 MicpuC2_4303, 4303 Tetratricopeptide repeat [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001096.1_cds_GFH17099.1_11576 HaLaN_13655, GFH17099 Heat shock STI 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498140.1_7093 KAA8498140 Small glutamine-rich tetratricopeptide repeat-containing... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0042255 ribosome assembly IEP Enrichment
BP GO:0042256 mature ribosome assembly IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
InterPro domains Description Start Stop
IPR041243 STI1 263 311
IPR019734 TPR_repeat 71 97
No external refs found!