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  5. TP03G01210.1

TP03G01210.1


Description : Histone H2A/H2B/H3 [Interproscan].


Gene families : OG_01_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP03G01210.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264650 30779911, HTR27 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre06.g265000 30778874 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre06.g265250 30779294 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre06.g266650 30779741 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre06.g274350 30778588, HTR29 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre06.g274850 30778497 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre06.g275750 30779137 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre12.g504650 30791932 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre12.g504800 30793536, HTR16 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre12.g505500 30793498, HTR17 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre12.g506300 30792290, HTR18 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre12.g506500 30792666, HTR35 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre13.g569950 30784075, HTR2 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre17.g708150 30782647, HTR36 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre17.g709050 30782593, HTR3 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cz13g04210.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Dusal.0093s00033.1 33185318 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Dusal.0194s00024.1 33199901 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Dusal.1067s00005.1 33188990 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Dusal.1079s00002.1 33193518 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Sro1642_g288060.1 Contig4503.g33764 Histone H3 0.01 OrthoFinder
Sro69_g038380.1 Contig4677.g34747 Histone H3 0.02 OrthoFinder
XM_002502558.1 MICPUN_58772, 58772 Histone H3 0.01 OrthoFinder
XM_003061662.1 MicpuC2_48264, 48264 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57380.1_9028 PRW57380 Histone H3 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32917.1_3775 PRW32917 Histone H3 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495290.1_1288 KAA8495290 Histone H3 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0018580 nitronate monooxygenase activity IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!