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  5. TP02G10220.1

TP02G10220.1


Description : WD40 repeat [Interproscan].


Gene families : OG_01_0000858 (OrthoFinder) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP02G10220.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
XM_003060974.1 MicpuC2_35057, 35057 WD40 repeat [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001521.1_cds_GFH19794.1_14271 HaLaN_16809, GFH19794 Mitotic checkpoint protein bub3 0.02 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494109.1_3973 KAA8494109 Mitotic checkpoint protein BUB3.1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 100 127
IPR001680 WD40_repeat 232 273
IPR001680 WD40_repeat 9 45
No external refs found!