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  5. TP02G08520.1

TP02G08520.1


Description : Translation elongation factor EFTs/EF1B, dimerisation [Interproscan].


Gene families : OG_01_0000919 (OrthoFinder) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP02G08520.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000310.59 tig00000310_g23984.t1 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
Cpa|evm.model.tig00021319.56 tig00021319_g20249.t1 Protein biosynthesis.organelle translation... 0.04 OrthoFinder
Cre10.g435500 30790031, EFT2 Protein biosynthesis.organelle translation... 0.03 OrthoFinder
Cre12.g519180 30791737 Protein biosynthesis.organelle translation... 0.07 OrthoFinder
Cz02g30200.t1 No alias S1 domain [Interproscan]. 0.03 OrthoFinder
Cz02g30210.t1 No alias Translation elongation factor EFTs/EF1B, dimerisation... 0.03 OrthoFinder
EOD07828 No alias Putative mitochondrial translation elongation factor... 0.02 OrthoFinder
EOD31447 No alias Translation elongation factor EFTs/EF1B, dimerisation... 0.01 OrthoFinder
EOD40006 No alias Putative mitochondrial translation elongation factor... 0.02 OrthoFinder
OT_02G04770.1 No alias Translation elongation factor EFTs/EF1B, dimerisation... 0.02 OrthoFinder
OT_04G00100.1 No alias S1 domain; Translation elongation factor EFTs/EF1B,... 0.04 OrthoFinder
Sro135_g063790.1 Contig2231.g18524 Factor Ts 0.06 OrthoFinder
Sro205_g086090.1 Contig2217.g18422 Factor Ts 0.02 OrthoFinder
Sro492_g153730.1 Contig2481.g20299 Factor Ts 0.07 OrthoFinder
Vocar.0006s0257.1 32894156 Translation elongation factor EFTs/EF1B, dimerisation;... 0.03 OrthoFinder
lcl|BLLF01000034.1_cds_GFH06339.1_816 HaLaN_00952, GFH06339 Elongation factor Ts 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58941.1_7328 PRW58941 Elongation factor Ts 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR014039 Transl_elong_EFTs/EF1B_dimer 106 303
No external refs found!