TP02G08310.1

Description : SUF system FeS cluster assembly, SufBD [Interproscan].

Gene families : OG_01_0003825 (OrthoFinder) Phylogenetic Tree(s): OG0003825_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: TP02G08310.1
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method	Actions
Transcript_contig_60548	60548	SUF system FeS cluster assembly, SufBD [Interproscan].	0.01	OrthoFinder
lcl\|VRMN01000011.1_cds_KAA8491838.1_4846	KAA8491838	UPF0051 protein	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	IEA	Interproscan
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Enrichment
MF	GO:0004408	holocytochrome-c synthase activity	IEP	Enrichment
CC	GO:0005739	mitochondrion	IEP	Enrichment
BP	GO:0006766	vitamin metabolic process	IEP	Enrichment
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Enrichment
BP	GO:0006771	riboflavin metabolic process	IEP	Enrichment
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEP	Enrichment
BP	GO:0009110	vitamin biosynthetic process	IEP	Enrichment
BP	GO:0009231	riboflavin biosynthetic process	IEP	Enrichment
MF	GO:0016829	lyase activity	IEP	Enrichment
MF	GO:0016830	carbon-carbon lyase activity	IEP	Enrichment
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Enrichment
MF	GO:0030170	pyridoxal phosphate binding	IEP	Enrichment
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Enrichment
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Enrichment
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Enrichment
MF	GO:0070279	vitamin B6 binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000825	SUF_FeS_clus_asmbl_SufBD	17	246

External Links

No external refs found!