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  5. TP02G08300.1

TP02G08300.1


Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0001369 (OrthoFinder) Phylogenetic Tree(s): OG0001369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP02G08300.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
PTI_13G03310.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
XM_002508054.1 MICPUN_60493, 60493 DEAD/DEAH box helicase 0.04 OrthoFinder
lcl|BLLF01000640.1_cds_GFH13682.1_8159 HaLaN_09616, GFH13682 DEAD/DEAH box helicase domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59022.1_7074 PRW59022 DEAD-box ATP-dependent RNA helicase 8 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 67 231
IPR001650 Helicase_C 268 374
No external refs found!