1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP02G07880.1

TP02G07880.1


Description : ChlI/MoxR, AAA lid domain; von Willebrand factor, type A; Magnesium chelatase ChlI domain [Interproscan].


Gene families : OG_01_0001370 (OrthoFinder) Phylogenetic Tree(s): OG0001370_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP02G07880.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001537.12 tig00001537_g9305.t1 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.06 OrthoFinder
Cre05.g242000 30783498, CHLD Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.13 OrthoFinder
Cz08g03270.t1 No alias von Willebrand factor, type A; Magnesium chelatase ChlI... 0.11 OrthoFinder
Dusal.0095s00034.1 33190264 ChlI/MoxR, AAA lid domain; Magnesium chelatase ChlI... 0.01 OrthoFinder
EOD09362 No alias von Willebrand factor, type A; ChlI/MoxR, AAA lid domain... 0.16 OrthoFinder
OT_05G05070.1 No alias ChlI/MoxR, AAA lid domain; von Willebrand factor, type... 0.1 OrthoFinder
PTI_02G06250.1 No alias ChlI/MoxR, AAA lid domain; von Willebrand factor, type... 0.22 OrthoFinder
Sro132_g062400.1 Contig2745.g22083 Chelatase subunit ChlD, chloroplastic 0.25 OrthoFinder
Transcript_contig_54242 54242 ChlI/MoxR, AAA lid domain; von Willebrand factor, type... 0.02 OrthoFinder
Vocar.0055s0003.1 32891609 Magnesium chelatase ChlI domain; ChlI/MoxR, AAA lid... 0.04 OrthoFinder
XM_002508787.1 MICPUN_62064, 62064 ChlI/MoxR, AAA lid domain; von Willebrand factor, type... 0.09 OrthoFinder
XM_003058698.1 MicpuC2_17386, 17386 ChlI/MoxR, AAA lid domain; von Willebrand factor, type... 0.01 OrthoFinder
lcl|BLLF01000643.1_cds_GFH13708.1_8185 HaLaN_09644, GFH13708 Mg-protoporphyrin IX chelatase 0.02 OrthoFinder
lcl|BLLF01001764.1_cds_GFH21107.1_15584 HaLaN_18347, GFH21107 Mg-protoporphyrin IX chelatase 0.04 OrthoFinder
lcl|BLLF01003017.1_cds_GFH26088.1_20565 HaLaN_24175, GFH26088 Mg-protoporphyrin IX chelatase 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59066.1_7269 PRW59066 Magnesium-chelatase subunit chloroplastic isoform B 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59067.1_7270 PRW59067 Magnesium-chelatase subunit chloroplastic isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR041628 ChlI/MoxR_AAA_lid 281 340
IPR000523 Mg_chelatse_chII-like_cat_dom 10 60
IPR000523 Mg_chelatse_chII-like_cat_dom 129 195
IPR002035 VWF_A 503 608
No external refs found!