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  5. TP02G04920.1

TP02G04920.1


Description : Ribosomal protein L31e [Interproscan].


Gene families : OG_01_0003819 (OrthoFinder) Phylogenetic Tree(s): OG0003819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP02G04920.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020703.20 tig00020703_g13122.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.42 OrthoFinder
Cre12.g489153 30793408 Protein biosynthesis.cytosolic ribosome.large subunit... 0.46 OrthoFinder
Cz10g20060.t1 No alias Ribosomal protein L31e [Interproscan]. 0.33 OrthoFinder
Dusal.0029s00041.1 33203765 Ribosomal protein L31e [Interproscan]. 0.15 OrthoFinder
EOD14536 No alias Ribosomal protein L31e [Interproscan]. 0.17 OrthoFinder
EOD38942 No alias Ribosomal protein L31e [Interproscan]. 0.17 OrthoFinder
OT_10G01980.1 No alias Ribosomal protein L31e [Interproscan]. 0.25 OrthoFinder
PTI_07G02120.1 No alias Ribosomal protein L31e [Interproscan]. 0.25 OrthoFinder
Sro1684_g291000.1 Contig2811.g22545 60S ribosomal protein L31 0.56 OrthoFinder
Vocar.0016s0109.1 32897984 Ribosomal protein L31e [Interproscan]. 0.16 OrthoFinder
XM_002503445.1 MICPUN_91199, 91199 Ribosomal protein L31e [Interproscan]. 0.02 OrthoFinder
XM_003055597.1 MicpuC2_24390, 24390 Ribosomal protein L31e [Interproscan]. 0.18 OrthoFinder
lcl|BLLF01004002.1_cds_GFH28711.1_23188 HaLaN_27249, GFH28711 Ribosomal protein L31e [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05819.1_6025 PRW05819 60S ribosomal L31 0.28 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493621.1_4383 KAA8493621 60S ribosomal protein L31 0.2 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006360 transcription by RNA polymerase I IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 11 90
No external refs found!