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  5. TP02G04350.1

TP02G04350.1


Description : Sphingolipid delta4-desaturase, N-terminal; Fatty acid desaturase domain [Interproscan].


Gene families : OG_01_0004250 (OrthoFinder) Phylogenetic Tree(s): OG0004250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP02G04350.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020723.7 tig00020723_g13426.t1 Lipid metabolism.sphingolipid metabolism.delta-4... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 75 298
IPR013866 Sphingolipid_d4-desaturase_N 18 50
No external refs found!