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  5. TP02G03820.1

TP02G03820.1


Description : Zinc finger, PHD-finger; Zinc finger, CXXC-type [Interproscan].


Gene families : OG_01_0004698 (OrthoFinder) Phylogenetic Tree(s): OG0004698_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP02G03820.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Sro925_g220870.1 Contig3078.g24546 Chromodomain-helicase-DNA-binding protein 3 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 306 348
IPR002857 Znf_CXXC 520 564
IPR002857 Znf_CXXC 229 277
No external refs found!