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  5. TP02G03790.1

TP02G03790.1


Description : Ribosomal protein L14e domain [Interproscan].


Gene families : OG_01_0003162 (OrthoFinder) Phylogenetic Tree(s): OG0003162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP02G03790.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.50 tig00000194_g14778.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.4 OrthoFinder
Cre17.g701200 30782127, RPL14 Protein biosynthesis.cytosolic ribosome.large subunit... 0.49 OrthoFinder
Cz03g21090.t1 No alias Ribosomal protein L14e domain [Interproscan]. 0.31 OrthoFinder
Dusal.0723s00004.1 33203597 Ribosomal protein L14e domain [Interproscan]. 0.16 OrthoFinder
EOD33918 No alias Ribosomal protein L14e domain [Interproscan]. 0.33 OrthoFinder
OT_06G03360.1 No alias Ribosomal protein L14e domain [Interproscan]. 0.14 OrthoFinder
PTI_03G00800.1 No alias Ribosomal protein L14e domain [Interproscan]. 0.44 OrthoFinder
Sro37_g023400.1 Contig1425.g13156 60S ribosomal protein L14 0.5 OrthoFinder
SymbC1.scaffold4442.3 4442.3 Ribosomal protein L14e domain [Interproscan]. 0.01 OrthoFinder
Vocar.0004s0210.1 32889813 Ribosomal protein L14e domain [Interproscan]. 0.28 OrthoFinder
XM_002499712.1 MICPUN_53957, 53957 Ribosomal protein L14e domain [Interproscan]. 0.35 OrthoFinder
XM_003062106.1 MicpuC2_28876, 28876 Ribosomal protein L14e domain [Interproscan]. 0.15 OrthoFinder
lcl|BLLF01000030.1_cds_GFH06254.1_731 HaLaN_00855, GFH06254 Ribosomal_L14e domain-containing protein 0.03 OrthoFinder
lcl|BLLF01003442.1_cds_GFH27352.1_21829 HaLaN_25658, GFH27352 Ribosomal_L14e domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60503.1_4556 PRW60503 60S ribosomal L14 0.26 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494017.1_3881 KAA8494017 60S ribosomal protein L14 0.19 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
InterPro domains Description Start Stop
IPR002784 Ribosomal_L14e_dom 48 121
No external refs found!