TP02G02830.1

Description : 3'-5' exonuclease domain [Interproscan].

Gene families : OG_01_0000497 (OrthoFinder) Phylogenetic Tree(s): OG0000497_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: TP02G02830.1
Cluster	HCCA: Cluster_123

Target	Alias	Description	ECC score	Gene Family Method	Actions
Transcript_contig_54520	54520	3'-5' exonuclease domain; HRDC domain [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008408	3'-5' exonuclease activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Enrichment
MF	GO:0005200	structural constituent of cytoskeleton	IEP	Enrichment
MF	GO:0005484	SNAP receptor activity	IEP	Enrichment
CC	GO:0005634	nucleus	IEP	Enrichment
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEP	Enrichment
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	Enrichment
BP	GO:0032324	molybdopterin cofactor biosynthetic process	IEP	Enrichment
CC	GO:0043227	membrane-bounded organelle	IEP	Enrichment
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Enrichment
BP	GO:0043545	molybdopterin cofactor metabolic process	IEP	Enrichment
BP	GO:0043631	RNA polyadenylation	IEP	Enrichment
BP	GO:0048193	Golgi vesicle transport	IEP	Enrichment
BP	GO:0051189	prosthetic group metabolic process	IEP	Enrichment
BP	GO:0051726	regulation of cell cycle	IEP	Enrichment
MF	GO:0060090	molecular adaptor activity	IEP	Enrichment
MF	GO:0070566	adenylyltransferase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002562	3'-5'_exonuclease_dom	319	466

External Links

No external refs found!