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  5. TP02G01330.1

TP02G01330.1


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP02G01330.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cre12.g501450 30793221 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Cz10g05080.t1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Cz12g01140.t1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
EOD18251 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
EOD25132 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Sro1229_g254480.1 Contig3654.g28212 Protein ligase Arkadia 0.02 OrthoFinder
Sro366_g127550.1 Contig1993.g17064 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Sro65_g036840.1 Contig155.g1754 Zinc finger, C3HC4 type (RING finger) [Interproscan]. 0.02 OrthoFinder
Sro66_g037310.1 Contig399.g5401 Protein ligase RNF165 0.02 OrthoFinder
SymbC1.scaffold328.13 328.13 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
TP07G00310.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_003062145.1 MicpuC2_9885, 9885 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005544 calcium-dependent phospholipid binding IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0007031 peroxisome organization IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 356 398
No external refs found!