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  5. TP02G00250.1

TP02G00250.1


Description : Ribosomal protein L38e [Interproscan].


Gene families : OG_01_0004462 (OrthoFinder) Phylogenetic Tree(s): OG0004462_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP02G00250.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021719.6 tig00021719_g23151.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 OrthoFinder
Cre07.g325746 30775115, RPL38 Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 OrthoFinder
Cz01g08210.t1 No alias Ribosomal protein L38e [Interproscan]. 0.16 OrthoFinder
Dusal.0190s00012.1 33189449 Ribosomal protein L38e [Interproscan]. 0.09 OrthoFinder
OT_11G02560.1 No alias Ribosomal protein L38e [Interproscan]. 0.06 OrthoFinder
PTI_05G02170.1 No alias Ribosomal protein L38e [Interproscan]. 0.16 OrthoFinder
Transcript_contig_61849 61849 Ribosomal protein L38e [Interproscan]. 0.03 OrthoFinder
Vocar.0003s0165.1 32889359 Ribosomal protein L38e [Interproscan]. 0.04 OrthoFinder
XM_002508915.1 MICPUN_63254, 63254 Ribosomal protein L38e [Interproscan]. 0.09 OrthoFinder
XM_003061755.1 MicpuC2_51368, 51368 Ribosomal protein L38e [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59048.1_7123 PRW59048 60S ribosomal L38 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0019843 rRNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR002675 Ribosomal_L38e 2 69
No external refs found!