1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP01G09420.1

TP01G09420.1


Description : Cupin-like domain 8 [Interproscan].


Gene families : OG_01_0002620 (OrthoFinder) Phylogenetic Tree(s): OG0002620_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP01G09420.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Sro270_g104350.1 Contig1617.g14619 Hypoxia-inducible factor 1-alpha inhibitor 0.03 OrthoFinder
Sro796_g203780.1 Contig2034.g17476 HSPB (Heat shock 27kDa) associated protein 1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
InterPro domains Description Start Stop
IPR041667 Cupin_8 425 549
No external refs found!