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  5. TP01G06520.1

TP01G06520.1


Description : Proteasomal ATPase OB C-terminal domain; ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain [Interproscan].


Gene families : OG_01_0002743 (OrthoFinder) Phylogenetic Tree(s): OG0002743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP01G06520.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001042.6 tig00001042_g6583.t1 Protein degradation.26S proteasome.regulatory... 0.11 OrthoFinder
Cre07.g329700 30774542, RPT2 Protein degradation.26S proteasome.regulatory... 0.21 OrthoFinder
Cz14g00180.t1 No alias AAA ATPase, AAA+ lid domain; Proteasomal ATPase OB... 0.06 OrthoFinder
EOD21334 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.09 OrthoFinder
OT_03G02920.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.02 OrthoFinder
PTI_03G00970.1 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.23 OrthoFinder
Sro35_g022630.1 Contig3323.g26140 26S proteasome regulatory subunit 4 0.28 OrthoFinder
Transcript_contig_56893 56893 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.04 OrthoFinder
Vocar.0017s0200.1 32891504 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.07 OrthoFinder
XM_002501574.1 MICPUN_106840, 106840 Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.09 OrthoFinder
XM_003062509.1 MicpuC2_49715, 49715 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.06 OrthoFinder
lcl|BLLF01000228.1_cds_GFH09364.1_3841 HaLaN_04486, GFH09364 26S proteasome regulatory subunit 0.02 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492200.1_5383 KAA8492200 26S proteasome regulatory subunit 4-like B 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 378 421
IPR032501 Prot_ATP_ID_OB 110 164
IPR003959 ATPase_AAA_core 223 355
No external refs found!