1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP01G05550.1

TP01G05550.1


Description : FCP1 homology domain [Interproscan].


Gene families : OG_01_0000609 (OrthoFinder) Phylogenetic Tree(s): OG0000609_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP01G05550.1
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Cz01g21150.t1 No alias FCP1 homology domain [Interproscan]. 0.02 OrthoFinder
Sro1582_g283810.1 Contig2540.g20708 Carboxy-terminal domain RNA polymerase II polypeptide A... 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58990.1_7232 PRW58990 Carboxy-terminal domain RNA polymerase II polypeptide A... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004806 triglyceride lipase activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR004274 FCP1_dom 1 182
No external refs found!