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  5. TP01G04990.1

TP01G04990.1


Description : Condensin complex subunit 1, N-terminal; Condensin complex subunit 1, C-terminal [Interproscan].


Gene families : OG_01_0002505 (OrthoFinder) Phylogenetic Tree(s): OG0002505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP01G04990.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021070.118 tig00021070_g17937.t1 Cell cycle.mitosis and meiosis.chromatin... 0.06 OrthoFinder
Cpa|evm.model.tig00021070.119 tig00021070_g17937.t1 Cell cycle.mitosis and meiosis.chromatin... 0.03 OrthoFinder
Cz14g02010.t1 No alias Condensin complex subunit 1, C-terminal; Condensin... 0.03 OrthoFinder
OT_02G03350.1 No alias Condensin complex subunit 1, N-terminal; Condensin... 0.04 OrthoFinder
PTI_03G02490.1 No alias Condensin complex subunit 1, C-terminal [Interproscan]. 0.11 OrthoFinder
Sro359_g126130.1 Contig295.g3874 Condensin complex subunit 1 0.11 OrthoFinder
Transcript_contig_89360 89360 Condensin complex subunit 1, N-terminal [Interproscan]. 0.03 OrthoFinder
XM_002502382.1 MICPUN_81844, 81844 Condensin complex component, non-smc subunit 0.04 OrthoFinder
lcl|BLLF01004974.1_cds_GFH30540.1_25017 HaLaN_29414, GFH30540 Hypothetical protein 0.05 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495990.1_1988 KAA8495990 Condensin complex subunit 1 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR032682 Cnd1_C 1077 1235
IPR024324 Condensin_cplx_su1_N 113 290
No external refs found!