1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP01G02790.1

TP01G02790.1


Description : Transcription factor CBF/NF-Y/archaeal histone domain; High mobility group box domain [Interproscan].


Gene families : OG_01_0000533 (OrthoFinder) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP01G02790.1
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Cre03.g193900 30787431 No description available 0.02 OrthoFinder
OT_14G01770.1 No alias High mobility group box domain; Transcription factor... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 219 277
IPR009071 HMG_box_dom 127 192
No external refs found!