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  5. Sro99_g050850.1

Sro99_g050850.1 (Contig1378.g12656)


Aliases : Contig1378.g12656

Description : Leucine rich repeat N-terminal domain


Gene families : OG_01_0000352 (OrthoFinder) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro99_g050850.1
Cluster HCCA: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
Sro1772_g296700.1 Contig4653.g34637 Leucine Rich Repeat 0.03 OrthoFinder
Sro801_g204390.1 Contig2787.g22404 STYKc 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!