1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro99_g050710.1

Sro99_g050710.1 (Contig1378.g12642)


Aliases : Contig1378.g12642

Description : Ubiquitin carboxyl-terminal hydrolase


Gene families : OG_01_0002860 (OrthoFinder) Phylogenetic Tree(s): OG0002860_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro99_g050710.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
OT_10G01320.1 No alias Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.02 OrthoFinder
PTI_01G02080.1 No alias Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.03 OrthoFinder
TP09G02120.1 No alias Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008376 acetylgalactosaminyltransferase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022414 reproductive process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032580 Golgi cisterna membrane IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0045132 meiotic chromosome segregation IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
BP GO:0098813 nuclear chromosome segregation IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903046 meiotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 515 955
No external refs found!