1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro994_g229020.1

Sro994_g229020.1 (Contig3591.g27754)


Aliases : Contig3591.g27754

Description : CRAL-TRIO lipid binding domain [Interproscan].


Gene families : OG_01_0000437 (OrthoFinder) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro994_g229020.1
Cluster HCCA: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
Sro2456_g328210.1 Contig2438.g19982 Hypothetical protein 0.03 OrthoFinder
Sro3469_g348360.1 Contig4528.g33911 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro3469_g348370.1 Contig4528.g33912 Hypothetical protein 0.07 OrthoFinder
Sro377_g130070.1 Contig75.g810 Hypothetical protein 0.03 OrthoFinder
Sro735_g194890.1 Contig2764.g22261 CRAL-TRIO lipid binding domain [Interproscan]. 0.06 OrthoFinder
Sro769_g199830.1 Contig2367.g19485 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004806 triglyceride lipase activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019211 phosphatase activator activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 161 229
No external refs found!