1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro994_g229000.1

Sro994_g229000.1 (Contig3591.g27752)


Aliases : Contig3591.g27752

Description : CRAL-TRIO lipid binding domain [Interproscan].


Gene families : OG_01_0000437 (OrthoFinder) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro994_g229000.1
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
Sro1693_g291630.1 Contig4594.g34330 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro1771_g296630.1 Contig3831.g29377 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro1874_g302980.1 Contig3840.g29507 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro238_g095600.1 Contig99.g1206 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro2456_g328210.1 Contig2438.g19982 Hypothetical protein 0.04 OrthoFinder
Sro32_g021090.1 Contig3715.g28582 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro3469_g348360.1 Contig4528.g33911 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro3469_g348370.1 Contig4528.g33912 Hypothetical protein 0.03 OrthoFinder
Sro377_g130070.1 Contig75.g810 Hypothetical protein 0.03 OrthoFinder
Sro44_g026610.1 Contig358.g4830 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro451_g145670.1 Contig1599.g14511 CRAL-TRIO lipid binding domain [Interproscan]. 0.05 OrthoFinder
Sro735_g194890.1 Contig2764.g22261 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0015129 lactate transmembrane transporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015727 lactate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015850 organic hydroxy compound transport IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032880 regulation of protein localization IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0050708 regulation of protein secretion IEP Enrichment
BP GO:0051046 regulation of secretion IEP Enrichment
BP GO:0051049 regulation of transport IEP Enrichment
BP GO:0051223 regulation of protein transport IEP Enrichment
BP GO:0070201 regulation of establishment of protein localization IEP Enrichment
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Enrichment
BP GO:1903530 regulation of secretion by cell IEP Enrichment
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 160 230
No external refs found!