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  5. Sro98_g050510.1

Sro98_g050510.1 (Contig3362.g26343)


Aliases : Contig3362.g26343

Description : Protein kinase ATR


Gene families : OG_01_0000135 (OrthoFinder) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro98_g050510.1
Cluster HCCA: Cluster_299

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020537.66 tig00020537_g10291.t1 Protein modification.phosphorylation.atypical kinase... 0.01 OrthoFinder
Cre09.g397327 30781509 No description available 0.03 OrthoFinder
Cre13.g564350 30784083 Protein modification.phosphorylation.atypical kinase... 0.01 OrthoFinder
Cre13.g572050 30784348 Protein modification.phosphorylation.atypical kinase... 0.02 OrthoFinder
Cz12g22120.t1 No alias FATC domain; PIK-related kinase, FAT;... 0.05 OrthoFinder
Cz14g13010.t1 No alias Phosphatidylinositol 3-/4-kinase, catalytic domain; FATC... 0.03 OrthoFinder
Dusal.0207s00006.1 33190103 Phosphatidylinositol 3-/4-kinase, catalytic domain; FATC... 0.02 OrthoFinder
Dusal.0207s00007.1 33190105 Phosphatidylinositol 3-/4-kinase, catalytic domain;... 0.02 OrthoFinder
Dusal.0381s00003.1 33189370 Hypothetical protein 0.01 OrthoFinder
Dusal.1038s00002.1 33202274 Phosphatidylinositol 3-/4-kinase, catalytic domain; FATC... 0.03 OrthoFinder
EOD03941 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD07842 No alias Putative target of rapamycin protein [Ensembl]. 0.03 OrthoFinder
EOD17664 No alias Phosphatidylinositol 3-/4-kinase, catalytic domain... 0.01 OrthoFinder
EOD37357 No alias Phosphatidylinositol 3-/4-kinase, catalytic domain... 0.01 OrthoFinder
OT_07G03600.1 No alias PIK-related kinase, FAT; UME domain;... 0.02 OrthoFinder
OT_12G01920.1 No alias Phosphatidylinositol 3-/4-kinase, catalytic domain; FATC... 0.03 OrthoFinder
PTI_04G06040.1 No alias Phosphatidylinositol 3-/4-kinase, catalytic domain;... 0.05 OrthoFinder
PTI_12G03720.1 No alias Phosphatidylinositol 3-/4-kinase, catalytic domain; FATC... 0.05 OrthoFinder
PTI_13G03670.1 No alias Domain of unknown function DUF3385, target of rapamycin... 0.03 OrthoFinder
PTI_13G03680.1 No alias FKBP12-rapamycin binding domain; Phosphatidylinositol... 0.02 OrthoFinder
TP12G03460.1 No alias FATC domain; Domain of unknown function DUF3385, target... 0.04 OrthoFinder
Transcript_contig_54665 54665 PIK-related kinase, FAT [Interproscan]. 0.01 OrthoFinder
Transcript_contig_57308 57308 Phosphatidylinositol 3-/4-kinase, catalytic domain... 0.01 OrthoFinder
XM_002502771.1 MICPUN_75688, 75688 FATC domain; Phosphatidylinositol 3-/4-kinase, catalytic... 0.02 OrthoFinder
XM_003054790.1 MicpuC2_30638, 30638 Phosphatidylinositol 3-/4-kinase, catalytic domain; FATC... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030915 Smc5-Smc6 complex IEP Enrichment
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0033045 regulation of sister chromatid segregation IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0051983 regulation of chromosome segregation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0106068 SUMO ligase complex IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
BP GO:1905818 regulation of chromosome separation IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003151 PIK-rel_kinase_FAT 2495 2885
IPR003152 FATC_dom 3507 3537
IPR000403 PI3/4_kinase_cat_dom 3166 3428
No external refs found!