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  5. Sro98_g050440.1

Sro98_g050440.1 (Contig3362.g26336)


Aliases : Contig3362.g26336

Description : Inherit from NOG: Neuroguidin, EIF4E binding protein


Gene families : OG_01_0002261 (OrthoFinder) Phylogenetic Tree(s): OG0002261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro98_g050440.1
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.45 tig00022075_g23606.t1 No description available 0.06 OrthoFinder
Cre09.g394399 30780529 No description available 0.07 OrthoFinder
Cz16g17190.t1 No alias Sas10 C-terminal domain [Interproscan]. 0.02 OrthoFinder
Cz16g17200.t1 No alias Sas10/Utp3/C1D [Interproscan]. 0.05 OrthoFinder
EOD14890 No alias Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. 0.03 OrthoFinder
OT_02G03770.1 No alias Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. 0.02 OrthoFinder
PTI_01G09370.1 No alias Sas10 C-terminal domain [Interproscan]. 0.11 OrthoFinder
PTI_04G05740.1 No alias Hypothetical protein 0.08 OrthoFinder
TP03G07600.1 No alias Sas10/Utp3/C1D [Interproscan]. 0.06 OrthoFinder
Vocar.0009s0185.1 32893539 Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. 0.05 OrthoFinder
XM_002502780.1 MICPUN_59233, 59233 Sas10 C-terminal domain; Sas10/Utp3/C1D [Interproscan]. 0.04 OrthoFinder
XM_003060898.1 MicpuC2_60704, 60704 Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01001084.1_cds_GFH17015.1_11492 HaLaN_13548, GFH17015 Sas10 domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45524.1_1307 PRW45524 Something about silencing 10 0.07 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497949.1_6902 KAA8497949 Neuroguidin 0.06 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492404.1_9097 KAA8492404 Something about silencing protein 10 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006360 transcription by RNA polymerase I IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0008987 quinolinate synthetase A activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR007146 Sas10/Utp3/C1D 18 96
No external refs found!