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  5. Sro98_g050390.1

Sro98_g050390.1 (Contig3362.g26331)


Aliases : Contig3362.g26331

Description : Fatty acid oxidation complex subunit alpha


Gene families : OG_01_0000429 (OrthoFinder) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro98_g050390.1
Cluster HCCA: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
Cre12.g534350 30791852 Peroxisomal fatty acid beta-oxidation multifunctional... 0.02 OrthoFinder
PTI_20G01970.1 No alias 3-hydroxyacyl-CoA dehydrogenase, NAD binding;... 0.02 OrthoFinder
SymbC1.scaffold109.14 109.14 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Fumarate... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEA Interproscan
BP GO:0006631 fatty acid metabolic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008061 chitin binding IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
CC GO:0061617 MICOS complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR006108 3HC_DH_C 232 329
IPR006176 3-OHacyl-CoA_DH_NAD-bd 48 229
No external refs found!