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  5. Sro96_g049670.1

Sro96_g049670.1 (Contig3763.g28893)


Aliases : Contig3763.g28893

Description : Leucine rich repeat N-terminal domain


Gene families : OG_01_0006743 (OrthoFinder) Phylogenetic Tree(s): OG0006743_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro96_g049670.1
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
Sro1139_g245460.1 Contig125.g1422 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro4278_g353600.1 Contig3372.g26406 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!