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  5. Sro963_g225330.1

Sro963_g225330.1 (Contig3377.g26434)


Aliases : Contig3377.g26434

Description : ERAD-associated E3 ubiquitin-protein ligase component


Gene families : OG_01_0000179 (OrthoFinder) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro963_g225330.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Sro1227_g254310.1 Contig334.g4443 U-box domain-containing protein 0.04 OrthoFinder
Sro1438_g272650.1 Contig3435.g26744 Sel1 domain protein repeat-containing protein 0.09 OrthoFinder
Sro1588_g284330.1 Contig4233.g32103 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro214_g088890.1 Contig282.g3674 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro227_g092440.1 Contig327.g4356 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro256_g100570.1 Contig3587.g27702 Hypothetical protein 0.05 OrthoFinder
Sro25_g017160.1 Contig1417.g13055 U box domain [Interproscan]. 0.04 OrthoFinder
Sro2646_g333590.1 Contig1915.g16544 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro341_g121570.1 Contig3952.g30289 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro361_g126480.1 Contig1094.g10573 SAM and U-box domain-containing protein 1 0.04 OrthoFinder
Sro3_g002900.1 Contig3832.g29475 Sel1 domain protein repeat-containing protein 0.11 OrthoFinder
Sro459_g147320.1 Contig4657.g34672 U box domain [Interproscan]. 0.06 OrthoFinder
Sro59_g034410.1 Contig571.g7287 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro793_g203310.1 Contig534.g6939 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro820_g207210.1 Contig34.g203 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro897_g217530.1 Contig4351.g32806 U box domain [Interproscan]. 0.03 OrthoFinder
Sro963_g225240.1 Contig3377.g26425 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR006597 Sel1-like 72 106
IPR006597 Sel1-like 144 177
No external refs found!