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  5. Sro942_g222690.1

Sro942_g222690.1 (Contig1838.g16133)


Aliases : Contig1838.g16133

Description : Binding protein ZnuC


Gene families : OG_01_0001466 (OrthoFinder) Phylogenetic Tree(s): OG0001466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro942_g222690.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
OT_08G00860.1 No alias ABC-transporter extension domain; ABC transporter-like... 0.03 OrthoFinder
OT_16G01200.1 No alias ABC transporter-like [Interproscan]. 0.02 OrthoFinder
PTI_23G01670.1 No alias ABC transporter-like; ABC-transporter extension domain... 0.06 OrthoFinder
XM_002501376.1 MICPUN_100107, 100107 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_002502948.1 MICPUN_97601, 97601 ATP-binding cassette superfamily 0.05 OrthoFinder
XM_003058816.1 MicpuC2_45533, 45533 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494931.1_3461 KAA8494931 Putative ABC transporter ATP-binding protein YdiF 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 95 182
No external refs found!