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  5. Sro93_g048630.1

Sro93_g048630.1 (Contig3841.g29551)


Aliases : Contig3841.g29551

Description : Ankyrin repeat protein


Gene families : OG_01_0000052 (OrthoFinder) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro93_g048630.1
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Sro157_g071250.1 Contig2362.g19415 Ankyrin repeat protein 0.06 OrthoFinder
Sro188_g081090.1 Contig1383.g12710 Ankyrin repeat protein 0.05 OrthoFinder
Sro2018_g311240.1 Contig4652.g34631 Ankyrin repeat protein 0.06 OrthoFinder
Sro2143_g316260.1 Contig60.g485 Ankyrin repeat protein 0.03 OrthoFinder
Sro218_g089980.1 Contig1136.g10899 Ankyrin repeat protein 0.06 OrthoFinder
Sro314_g115110.1 Contig2448.g20037 Ankyrin repeat protein 0.03 OrthoFinder
Sro425_g140200.1 Contig3537.g27365 Ankyrin repeat protein 0.04 OrthoFinder
Sro55_g032220.1 Contig4458.g33496 Ankyrin repeat protein 0.06 OrthoFinder
Sro55_g032470.1 Contig4458.g33521 Ankyrin containing protein (ISS) 0.04 OrthoFinder
Sro57_g033400.1 Contig284.g3708 Hypothetical protein 0.05 OrthoFinder
Sro605_g174260.1 Contig514.g6792 Ankyrin containing protein (ISS) 0.03 OrthoFinder
Sro72_g039800.1 Contig1459.g13379 Ankyrin containing protein (ISS) 0.02 OrthoFinder
Sro790_g202870.1 Contig4757.g458 Ankyrin repeat protein 0.03 OrthoFinder
Sro883_g215441.1 No alias Hypothetical protein 0.02 OrthoFinder
Sro932_g221620.1 Contig2857.g22905 Ankyrin repeat protein 0.03 OrthoFinder
Sro932_g221650.1 Contig2857.g22908 Ankyrin repeat protein 0.05 OrthoFinder
Sro952_g224061.1 No alias Hypothetical protein 0.05 OrthoFinder
XM_003063841.1 MicpuC2_53668, 53668 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!