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  5. Sro92_g048170.1

Sro92_g048170.1 (Contig486.g6577)


Aliases : Contig486.g6577

Description : Leucine Rich Repeat


Gene families : OG_01_0000303 (OrthoFinder) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro92_g048170.1
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
Sro2032_g311900.1 Contig3520.g27239 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro338_g120920.1 Contig15.g129 Leucine Rich Repeat 0.03 OrthoFinder
Sro342_g121650.1 Contig3070.g24465 Leucine Rich Repeat 0.03 OrthoFinder
Sro342_g121800.1 Contig3070.g24480 Leucine Rich Repeat 0.05 OrthoFinder
Sro451_g145730.1 Contig1599.g14517 Leucine Rich Repeat 0.05 OrthoFinder
Sro451_g145750.1 Contig1599.g14519 Leucine Rich Repeat 0.03 OrthoFinder
Sro5_g004030.1 Contig4001.g30718 Fibronectin leucine rich transmembrane protein 2 0.02 OrthoFinder
Sro603_g174020.1 Contig4246.g32161 Leucine Rich Repeat 0.05 OrthoFinder
Sro7_g005830.1 Contig389.g5236 Receptor-like protein kinase precursor 0.03 OrthoFinder
Sro7_g006110.1 Contig389.g5264 Leucine Rich Repeat 0.04 OrthoFinder
Sro7_g006160.1 Contig389.g5269 Leucine rich repeat 0.02 OrthoFinder
Sro990_g228640.1 Contig427.g5788 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 206 264
No external refs found!