Sro920_g220230.1 (Contig2508.g20523)

Aliases : Contig2508.g20523

Description : U-box domain-containing protein

Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro920_g220230.1
Cluster	HCCA: Cluster_102

Target	Alias	Description	ECC score	Gene Family Method
Sro1511_g278700.1	Contig2369.g19497	E3 ubiquitin-protein ligase	0.04	OrthoFinder
Sro2947_g340800.1	Contig1399.g12866	Putative E3 ubiquitin-protein ligase LIN	0.04	OrthoFinder
Sro406_g136480.1	Contig2793.g22489	Zinc-finger of the MIZ type in Nse subunit	0.03	OrthoFinder
Sro920_g220200.1	Contig2508.g20520	Putative E3 ubiquitin-protein ligase LIN	0.03	OrthoFinder
Sro920_g220210.1	Contig2508.g20521	Putative E3 ubiquitin-protein ligase LIN	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004181	Znf_MIZ	46	97

External Links

No external refs found!