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  5. Sro91_g047870.2

Sro91_g047870.2


Description : CobW/HypB/UreG, nucleotide-binding domain; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal [Interproscan].


Gene families : OG_01_0000164 (OrthoFinder) Phylogenetic Tree(s): OG0000164_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro91_g047870.2
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cre12.g536900 30793606 No description available 0.01 OrthoFinder
Cz18g11070.t1 No alias Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.01 OrthoFinder
Dusal.0256s00014.1 33203443 CobW/HypB/UreG, nucleotide-binding domain [Interproscan]. 0.01 OrthoFinder
EOD23338 No alias CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.01 OrthoFinder
EOD27430 No alias CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.01 OrthoFinder
Sro91_g047870.1 Contig190.g2238 COBW domain-containing protein DDB_G0274527 0.08 OrthoFinder
Vocar.0034s0098.1 32893058 CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34073.1_3147 PRW34073 Cobalamin synthesis P47K 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR011629 Cbl_biosynth_CobW-like_C 793 914
IPR003495 CobW/HypB/UreG_dom 541 746
No external refs found!