1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro913_g219410.1

Sro913_g219410.1 (Contig577.g7322)


Aliases : Contig577.g7322

Description : Probable alanine aminotransferase, mitochondrial


Gene families : OG_01_0000908 (OrthoFinder) Phylogenetic Tree(s): OG0000908_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro913_g219410.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
PTI_04G03980.1 No alias Aminotransferase, class I/classII [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold7783.2 7783.2 Aminotransferase, class I/classII [Interproscan]. 0.01 OrthoFinder
Transcript_contig_89235 89235 Aminotransferase, class I/classII [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44404.1_2438 PRW44404 Alanine aminotransferase isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 139 518
No external refs found!