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  5. Sro909_g219050.1

Sro909_g219050.1 (Contig366.g4947)


Aliases : Contig366.g4947

Description : Linked kinase-associated serine/threonine phosphatase 2C


Gene families : OG_01_0000057 (OrthoFinder) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro909_g219050.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre09.g410600 30780454 Probable protein phosphatase 2C 11 OS=Oryza sativa... 0.01 OrthoFinder
PTI_11G00820.1 No alias PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_60195 60195 PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498475.1_7428 KAA8498475 Putative protein phosphatase 2C 10 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495308.1_1306 KAA8495308 Protein phosphatase 2C-like 2 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Enrichment
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 21 325
No external refs found!