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  5. Sro905_g218560.1

Sro905_g218560.1 (Contig2792.g22468)


Aliases : Contig2792.g22468

Description : Leucine Rich Repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro905_g218560.1
Cluster HCCA: Cluster_340

Target Alias Description ECC score Gene Family Method Actions
Sro1468_g275210.1 Contig3834.g29487 Leucine Rich Repeat 0.02 OrthoFinder
Sro1606_g285520.1 Contig770.g8706 Leucine Rich Repeat 0.04 OrthoFinder
Sro2158_g316940.1 Contig3584.g27688 Leucine Rich Repeat 0.03 OrthoFinder
Sro242_g096620.1 Contig554.g7080 Leucine Rich Repeat 0.03 OrthoFinder
Sro3045_g342740.1 Contig2560.g20802 Leucine Rich Repeat 0.03 OrthoFinder
Sro32_g020790.1 Contig3715.g28552 LRR receptor-like serine threonine-protein kinase At4g08850-like 0.03 OrthoFinder
Sro449_g145300.1 Contig3482.g27000 STYKc 0.05 OrthoFinder
Sro73_g040430.1 Contig3929.g30144 Leucine Rich Repeat 0.04 OrthoFinder
Sro837_g209160.1 Contig405.g5509 Leucine Rich Repeat 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!