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  5. Sro8_g006870.1

Sro8_g006870.1 (Contig89.g1000)


Aliases : Contig89.g1000

Description : Helicase


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro8_g006870.1
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
PTI_02G02880.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
PTI_08G04480.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
Sro154_g070010.1 Contig2716.g21879 Helicase-associated [Interproscan]. 0.04 OrthoFinder
Sro369_g128180.1 Contig1690.g15141 Helicase 0.03 OrthoFinder
Sro369_g128230.1 Contig1690.g15146 Helicase 0.03 OrthoFinder
Sro472_g149930.1 Contig4323.g32608 Helicase 0.04 OrthoFinder
Sro557_g166150.1 Contig1427.g13185 Helicase associated domain 0.03 OrthoFinder
SymbC1.scaffold1960.2 1960.2 Helicase-associated [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 39 104
IPR005114 Helicase_assoc 115 180
No external refs found!