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  5. Sro8_g006820.1

Sro8_g006820.1 (Contig89.g995)


Aliases : Contig89.g995

Description : ECF subfamily RNA polymerase sigma-24 subunit


Gene families : OG_01_0000220 (OrthoFinder) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro8_g006820.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Sro118_g057670.1 Contig2714.g21837 ECF subfamily RNA polymerase sigma-24 subunit 0.08 OrthoFinder
Sro1913_g305010.1 Contig2551.g20751 Domain protein 0.03 OrthoFinder
Sro257_g100830.1 Contig2018.g17262 Hypothetical protein 0.03 OrthoFinder
Sro379_g130440.1 Contig3398.g26561 Hypothetical protein 0.07 OrthoFinder
Sro39_g023990.1 Contig234.g2819 Intercellular signal essential for a variety of... 0.03 OrthoFinder
Sro459_g147250.1 Contig4657.g34665 Hypothetical protein 0.06 OrthoFinder
Sro459_g147260.1 Contig4657.g34666 Hypothetical protein 0.06 OrthoFinder
Sro459_g147280.1 Contig4657.g34668 ECF subfamily RNA polymerase sigma-24 subunit 0.04 OrthoFinder
Sro57_g033500.1 Contig284.g3718 Hypothetical protein 0.03 OrthoFinder
Sro8_g006620.1 Contig89.g975 Intercellular signal essential for a variety of... 0.04 OrthoFinder
Sro8_g006650.3 No alias Hypothetical protein 0.03 OrthoFinder
Sro8_g006670.1 Contig89.g980 ECF subfamily RNA polymerase sigma-24 subunit 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!