1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro8_g006570.1

Sro8_g006570.1 (Contig89.g970)


Aliases : Contig89.g970

Description : Membrane


Gene families : OG_01_0000220 (OrthoFinder) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro8_g006570.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Sro118_g057670.1 Contig2714.g21837 ECF subfamily RNA polymerase sigma-24 subunit 0.04 OrthoFinder
Sro257_g100830.1 Contig2018.g17262 Hypothetical protein 0.05 OrthoFinder
Sro39_g023990.1 Contig234.g2819 Intercellular signal essential for a variety of... 0.02 OrthoFinder
Sro459_g147250.1 Contig4657.g34665 Hypothetical protein 0.04 OrthoFinder
Sro459_g147260.1 Contig4657.g34666 Hypothetical protein 0.04 OrthoFinder
Sro57_g033500.1 Contig284.g3718 Hypothetical protein 0.03 OrthoFinder
Sro8_g006620.1 Contig89.g975 Intercellular signal essential for a variety of... 0.03 OrthoFinder
Sro8_g006670.2 No alias Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment

No InterPro domains available for this sequence

No external refs found!