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  5. Sro897_g217450.1

Sro897_g217450.1 (Contig4351.g32798)


Aliases : Contig4351.g32798

Description : Calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A


Gene families : OG_01_0000012 (OrthoFinder) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro897_g217450.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Cz05g05240.t1 No alias 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.01 OrthoFinder
Dusal.0547s00004.1 33188674 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.01 OrthoFinder
Sro682_g186500.1 Contig1406.g12885 Receptor-type guanylate cyclase gcy 0.03 OrthoFinder
lcl|BLLF01000103.1_cds_GFH07565.1_2042 HaLaN_02384, GFH07565 Phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01001132.1_cds_GFH17336.1_11813 HaLaN_13949, GFH17336 Phosphodiesterase 0.02 OrthoFinder
lcl|BLLF01003620.1_cds_GFH27791.1_22268 HaLaN_26171, GFH27791 3'5'-cyclic nucleotide phosphodiesterase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008767 UDP-galactopyranose mutase activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002073 PDEase_catalytic_dom 112 243
No external refs found!