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Aliases : Contig1937.g16667
Description : Signalosome complex subunit 1
Gene families : OG_01_0004060 (OrthoFinder) Phylogenetic Tree(s): OG0004060_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro895_g217250.1 | |
| Cluster | HCCA: Cluster_309 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021608.5 | tig00021608_g22838.t1 | Protein degradation.peptide tagging.Related-to-Ubiquitin... | 0.03 | OrthoFinder | |
| Cre05.g234300 | 30783220 | Protein degradation.peptide tagging.Related-to-Ubiquitin... | 0.06 | OrthoFinder | |
| Cz14g20080.t1 | No alias | 26S proteasome regulatory subunit Rpn7/COP9 signalosome... | 0.02 | OrthoFinder | |
| OT_04G00130.1 | No alias | Proteasome component (PCI) domain; 26S proteasome... | 0.01 | OrthoFinder | |
| Vocar.0003s0394.1 | 32888833 | 26S proteasome regulatory subunit Rpn7/COP9 signalosome... | 0.02 | OrthoFinder | |
| XM_003062034.1 | MicpuC2_3283, 3283 | 26S proteasome regulatory subunit Rpn7/COP9 signalosome... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004518 | nuclease activity | IEP | Enrichment |
| MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
| MF | GO:0005048 | signal sequence binding | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006302 | double-strand break repair | IEP | Enrichment |
| BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Enrichment |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Enrichment |
| BP | GO:0009056 | catabolic process | IEP | Enrichment |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0010035 | response to inorganic substance | IEP | Enrichment |
| BP | GO:0010038 | response to metal ion | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| MF | GO:0016755 | aminoacyltransferase activity | IEP | Enrichment |
| MF | GO:0016756 | glutathione gamma-glutamylcysteinyltransferase activity | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Enrichment |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Enrichment |
| MF | GO:0017171 | serine hydrolase activity | IEP | Enrichment |
| MF | GO:0019899 | enzyme binding | IEP | Enrichment |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
| CC | GO:0030117 | membrane coat | IEP | Enrichment |
| MF | GO:0030145 | manganese ion binding | IEP | Enrichment |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Enrichment |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Enrichment |
| MF | GO:0033218 | amide binding | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| MF | GO:0034450 | ubiquitin-ubiquitin ligase activity | IEP | Enrichment |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0042221 | response to chemical | IEP | Enrichment |
| MF | GO:0042277 | peptide binding | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Enrichment |
| BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:0045185 | maintenance of protein location | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| MF | GO:0046923 | ER retention sequence binding | IEP | Enrichment |
| BP | GO:0046937 | phytochelatin metabolic process | IEP | Enrichment |
| BP | GO:0046938 | phytochelatin biosynthetic process | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051235 | maintenance of location | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0051651 | maintenance of location in cell | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Enrichment |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Enrichment |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
| No external refs found! |