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  5. Sro88_g046300.1

Sro88_g046300.1 (Contig265.g3288)


Aliases : Contig265.g3288

Description : Heterogeneous nuclear ribonucleoprotein Q acidic domain [Interproscan].


Gene families : OG_01_0003793 (OrthoFinder) Phylogenetic Tree(s): OG0003793_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro88_g046300.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000017.1_cds_PRW33133.1_3470 PRW33133 Long-chain-fatty-acid-ligase 15 0.01 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494208.1_4072 KAA8494208 Heterogeneous nuclear ribonucleoprotein Q acidic domain... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
InterPro domains Description Start Stop
IPR041337 hnRNP_Q_AcD 221 285
IPR041337 hnRNP_Q_AcD 710 771
No external refs found!