Sro889_g216580.1 (Contig1913.g16523)

Aliases : Contig1913.g16523

Description : Stress transcription factor A-3

Gene families : OG_01_0000044 (OrthoFinder) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro889_g216580.1
Cluster	HCCA: Cluster_196

Target	Alias	Description	ECC score	Gene Family Method
PTI_00G02960.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.03	OrthoFinder
PTI_04G05700.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.04	OrthoFinder
PTI_23G00680.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.05	OrthoFinder
PTI_23G00690.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.05	OrthoFinder
Sro1195_g251410.1	Contig4057.g31107	Shock factor protein 4	0.03	OrthoFinder
Sro1302_g260920.1	Contig3975.g30529	Hypothetical protein	0.03	OrthoFinder
Sro1811_g299210.1	Contig3692.g28473	Shock factor protein	0.04	OrthoFinder
Sro1900_g304250.1	Contig3998.g30694	Stress transcription factor B-2b	0.05	OrthoFinder
Sro237_g095240.1	Contig1864.g16295	Heat stress transcription factor	0.03	OrthoFinder
Sro248_g098370.1	Contig288.g3771	Heat stress transcription factor	0.04	OrthoFinder
Sro450_g145560.1	Contig271.g3481	Heat stress transcription factor	0.03	OrthoFinder
Sro509_g157090.1	Contig4289.g32402	Shock factor protein	0.03	OrthoFinder
Sro53_g031420.1	Contig1592.g14482	Shock factor protein	0.04	OrthoFinder
Sro769_g199870.1	Contig2367.g19489	Shock factor protein	0.04	OrthoFinder
TP02G08390.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder
TP02G08610.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.03	OrthoFinder
TP15G02960.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.04	OrthoFinder
TP24G00230.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Enrichment
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Enrichment
MF	GO:0051213	dioxygenase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	96	186

External Links

No external refs found!

Sro889_g216580.1 (Contig1913.g16523)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation