1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro885_g216130.1

Sro885_g216130.1 (Contig1350.g12422)


Aliases : Contig1350.g12422

Description : Plant transposon protein


Gene families : OG_01_0003238 (OrthoFinder) Phylogenetic Tree(s): OG0003238_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro885_g216130.1
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Sro139_g065030.1 Contig4334.g32679 Plant transposon protein 0.04 OrthoFinder
Sro6_g005350.1 Contig175.g2040 Plant transposon protein 0.08 OrthoFinder
Sro855_g211320.1 Contig1132.g10846 Plant transposon protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 275 438
No external refs found!