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  5. Sro882_g215330.1

Sro882_g215330.1 (Contig1771.g15676)


Aliases : Contig1771.g15676

Description : Zinc finger, RING-CH-type; Protein of unknown function UPF0301 [Interproscan].


Gene families : OG_01_0000217 (OrthoFinder) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro882_g215330.1
Cluster HCCA: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
Vocar.0014s0207.1 32888456 Zinc finger, RING-CH-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 99 154
IPR003774 UPF0301 208 303
IPR003774 UPF0301 467 522
No external refs found!