1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro874_g214200.1

Sro874_g214200.1 (Contig589.g7371)


Aliases : Contig589.g7371

Description : Ubiquitin


Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro874_g214200.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
EOD24536 No alias Ribosomal protein L41; Ubiquitin-like domain [Interproscan]. 0.02 OrthoFinder
EOD34096 No alias Ribosomal protein L41; Ubiquitin-like domain [Interproscan]. 0.02 OrthoFinder
EOD39616 No alias Superoxide dismutase, Nickel-type [Interproscan]. 0.02 OrthoFinder
OT_01G05450.1 No alias Superoxide dismutase, Nickel-type [Interproscan]. 0.03 OrthoFinder
Vocar.0009s0373.1 32893174 Ubiquitin-like domain [Interproscan]. 0.03 OrthoFinder
XM_002506486.1 MICPUN_64440, 64440 Superoxide dismutase, Nickel-type; Ubiquitin-like domain... 0.02 OrthoFinder
lcl|BLLF01000362.1_cds_GFH10965.1_5442 HaLaN_06377, GFH10965 Cytoplasmic ribosomal protein 79 0.01 OrthoFinder
lcl|BLLF01000867.1_cds_GFH15555.1_10032 HaLaN_11800, GFH15555 Ubiquitin-like domain-containing protein 0.02 OrthoFinder
lcl|BLLF01002296.1_cds_GFH23539.1_18016 HaLaN_21164, GFH23539 Ubiquitin-60S ribosomal L40 0.01 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493558.1_4320 KAA8493558 Ubiquitin-60S ribosomal protein L40-2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
MF GO:0016151 nickel cation binding IEA Interproscan
MF GO:0016209 antioxidant activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR014123 Superoxide_dismutase_Ni-type 68 200
No external refs found!