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  5. Sro867_g213220.1

Sro867_g213220.1 (Contig3090.g24652)


Aliases : Contig3090.g24652

Description : Polyubiquitin (Fragment)


Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro867_g213220.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.76 tig00000144_g9067.t1 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder
Cpa|evm.model.tig00000983.16 tig00000983_g5907.t1 Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana 0.03 OrthoFinder
Dusal.0023s00044.1 33198053 Sde2, N-terminal ubiquitin domain [Interproscan]. 0.01 OrthoFinder
XM_003063226.1 MicpuC2_36384, 36384 Ubiquitin-like domain; Superoxide dismutase, Nickel-type... 0.01 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39178.1_2579 PRW39178 Large proline-rich BAG6 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 175 221
IPR000626 Ubiquitin-like_dom 52 97
IPR000626 Ubiquitin-like_dom 102 156
No external refs found!