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  5. Sro850_g210681.1

Sro850_g210681.1


Description : Hypothetical protein


Gene families : OG_01_0000052 (OrthoFinder) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro850_g210681.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Sro1117_g242990.1 Contig1027.g10245 Ankyrin containing protein (ISS) 0.03 OrthoFinder
Sro1118_g243090.1 Contig728.g8387 Ankyrin repeat protein 0.04 OrthoFinder
Sro1284_g259220.1 Contig3866.g29731 Ankyrin repeat protein 0.01 OrthoFinder
Sro1351_g265240.1 Contig2702.g21767 Ankyrin containing protein (ISS) 0.03 OrthoFinder
Sro157_g071340.1 Contig2362.g19424 Ankyrin repeat protein 0.02 OrthoFinder
Sro1679_g290690.1 Contig1151.g11018 Ankyrin repeat protein 0.05 OrthoFinder
Sro1891_g303790.1 Contig3442.g26776 Ankyrin repeat protein 0.03 OrthoFinder
Sro1_g000550.1 Contig3007.g23970 Hypothetical protein 0.05 OrthoFinder
Sro268_g103620.1 Contig1776.g15711 Ankyrin containing protein (ISS) 0.04 OrthoFinder
Sro269_g103910.1 Contig1337.g12312 Ankyrin repeat protein 0.04 OrthoFinder
Sro326_g118180.1 Contig1080.g10506 Ankyrin repeat protein 0.02 OrthoFinder
Sro534_g161730.1 Contig3269.g25738 Ankyrin containing protein (ISS) 0.02 OrthoFinder
Sro543_g163600.1 Contig1245.g11646 Ankyrin repeat protein 0.03 OrthoFinder
Sro591_g171980.1 Contig3321.g26069 Ankyrin repeat protein 0.02 OrthoFinder
Sro67_g037600.1 Contig495.g6676 Ankyrin repeat protein 0.01 OrthoFinder
Sro691_g187720.1 Contig1133.g10867 Ankyrin repeat protein 0.01 OrthoFinder
Sro72_g039641.1 No alias Hypothetical protein 0.04 OrthoFinder
Sro82_g043750.1 Contig4032.g30966 Ankyrin repeat protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004834 tryptophan synthase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!