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  5. Sro83_g044420.1

Sro83_g044420.1 (Contig4450.g33416)


Aliases : Contig4450.g33416

Description : NADP-reducing hydrogenase subunit HndD


Gene families : OG_01_0001200 (OrthoFinder) Phylogenetic Tree(s): OG0001200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro83_g044420.1
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8497773.1_6726 KAA8497773 NADP-reducing hydrogenase subunit HndC 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR004108 Fe_hydrogenase_lsu_C 258 584
IPR003097 CysJ-like_FAD-binding 877 1089
IPR001433 OxRdtase_FAD/NAD-bd 1120 1232
IPR008254 Flavodoxin/NO_synth 676 829
IPR003149 Fe_hydrogenase_ssu 593 647
IPR017896 4Fe4S_Fe-S-bd 170 238
No external refs found!