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Aliases : Contig3133.g24873
Description : Small nuclear ribonucleoprotein-associated protein
Gene families : OG_01_0002828 (OrthoFinder) Phylogenetic Tree(s): OG0002828_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Vocar.0050s0055.1 | 32892381 | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW60128.1_6408 | PRW60128 | Small nuclear ribonucleo-associated B | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0043248 | proteasome assembly | IEP | Enrichment |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | LSM_dom_euk/arc | 8 | 82 |
| No external refs found! |